Month: March 2020

Interview by Charlotte Beloe

Carolina Gutiérrez-Chávez is a Scientia PhD Candidate and one of our UNSW Women in Maths and Science Champions. She has always believed that following her passions is important and this week we got to find out how that has influenced her career as a scientist.

 

Can you tell us a bit about your research?

I’m studying microbial bioactivity and its ecological role in Antarctica. Bioactivity is the ability of certain compounds, in this case metabolites, to intervene in biochemical or physiological processes.

Metabolites are classified into primary and specialised metabolites. Primary metabolites are those that have a direct role in the growth or reproduction (like proteins, carbohydrates, nucleic acids and lipids), while specialised metabolites are associated with processes of adaptation, competition, communication and protection against environmental stress. Specialised metabolites give the microorganism competitive advantages to guarantee their survival. They have become an attractive research point to understand ecological functions and can provide industrial and biotechnological applications.

Recently, in my laboratory, the genome of different bacteria isolated from the Antarctic soil were obtained. This information allows us, among other things, to predict the potential specialised metabolites that these bacteria are capable of synthesising. In my research I focus on finding evidence (bioactivity) of those specialised metabolites that were predicted through the sequence of genes and finally elucidate what their ecological role is to understand the strategies that these bacteria use to survive in extreme conditions such as Antarctica.

 

Wow, that sounds fascinating! What drew you to this area of research?

This is a funny story! In Mexico, my home country, I completed a master’s degree and my research was focused on understanding how coral bleaching affects the expression of toxins in fire corals. I really enjoyed working with corals, but very soon I realised the real heroes for the survival of corals are the symbiotic microorganisms that provide the coral up to 80% of the energy that this coral require to survive.

Every time I had a presentation to my colleagues or panel, all the questions I ended up answering with something about microorganisms instead of corals! My colleagues used to say ‘You talk with joy about corals, but with passion about microorganisms’. I decided to refocus my research profile and… here I am!

 

It’s always important to pursue what you’re passionate about, was it this shift in your research that brought you to UNSW?

Well, I realised that in my two professional jobs I acquired tools to work in microbiology, in the master degree I learnt about the importance of ecological impact, so my mission was to find a project that would allow me to merge my experience with my passion. I remember subscribing to countless newsletters about PhD programs around the world ‘the good one will come when you least expect it’ I thought.

One night, after a dinner with some friends I found in my spam a newsletter from a University offering interesting programs, it was UNSW! I saw many options, but Ferrari Lab stole my attention and it was love at first sight! I could not believe that there were people working with bacteria from Antarctica, what a stroke of luck!

 

How serendipitous! We’re certainly very happy to have you with us at UNSW. Could you give us a peek into your daily life…what is your average day like?

The truth is that I don’t have an average day! But if I could summarise my activities and more constant schedules they would be:

5:20 am: I practice jogging, I like it because it oxygenates my brain, helps me to have more energy and I feel happy in the day, if I improve my resistance or speed there is an extra dose of happiness! I go home, do stretching, a little meditation, and get ready for Uni.

8:30 / 9:30 am: I arrive at the University. I spend the first 30 minutes of my day answering important emails and scheduling the activities that I will do throughout the day in the lab / office. Generally, my energy is higher in the morning so here I do the activities that require more concentration or effort, such as experiments and occasionally writing.

1:00 / 2:00 pm: I have lunch; I usually take advantage of this time because in Mexico it’s around 6-7 pm and friends or family are usually at home, then we can catch up and I disconnect a little bit from academic stuff. After lunch, I return to the lab to finish some experiments or to the office with administrative things, type writing.

5:00 / 6:00 pm: I leave the University and I like to go to the gym later (If I have energy).

9:00 pm: I usually get home around this time, if there is a dinner invitation or catch up with a friend it is always accepted!

In my case it is difficult to maintain a routine in science because most of my activities are around lab experiments. The positive thing is I have no a routine then every day will be a surprise even for me!

 

Sounds like your days are pretty jam-packed! If you get extra free time, what are some activities you like to do?

 I’m international student, I have lived in Australia for a year and a half, so I’m still exploring new places around Sydney. I enjoy outdoor activities, one of my favourites is hiking on weekends. I also enjoy my time at home cooking, learning new recipes or reading.

When there is an opportunity, I like to go out with friends and dancing or just a catch up with a coffee or cup of wine.

I also like studying languages, I think they help to understand a culture more deeply and how it influences its psychology.

 

 It seems you have quite a lot of different interests, did you always want to do science?

When I was in high school I realised that I was good at math and I participated in many math competitions obtaining good scores. My teachers thought it would be a good idea for me to also participate in biology and chemistry competitions, but I was not as successful as in maths. That did not stop me and I began to participate with mini projects, I remember that the first one was to analyse how the components of the batteries affect the growth of plants, I was 14 years old!

After high school I had to choose a career, because of my math background my career aptitude test suggested studying some engineering or physics, but I was more passionate about biotechnology. It was complicated for me to decide between ‘the talent’ or what I really liked, and I chose biotechnology. I learned that we all have strengths and weaknesses, but in my case passion for what I do governs my life, maybe today we are not good at something, but persistence always makes us grow and improve.

 

 

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Learn more about the Ferrari Lab

 

Interview by Sara Loo

Understanding cancer has been on the heart of Early Career Champion Natalia Castaño Rodríguez ever since she was a clinician in her home country of Colombia. She moved to Sydney in 2009 to pursue research and has quickly established herself as an emerging player in the field of immunogenetics and gastric cancer. On top of her research, she has proven to be a leader in the School of Biotechnology and Biomolecular Sciences at UNSW and keeps herself busy as Chair of the UNSW Early Career Academic Network. At the beginning of this year, Natalia was awarded two fellowships – a credit to her passion for her work and her driven nature. We asked her a few questions this week to learn more about her journey so far.

 

You recently finished up as a National Health and Medical Research Council Early Career Fellow and were also just awarded a Cancer Institute NSW Early Career Fellowship and a UNSW Scientia Fellowship. Firstly, congratulations on your success! Can you explain your research to us?

I have been investigating the interplay between host mutations, the immune system and gastrointestinal microbiomes (i.e. the community of microorganisms that inhabit a particular environment) and their effects on gastrointestinal tumours (like gastric and oesophageal cancer) and other chronic inflammatory conditions such as Crohns’ disease and ulcerative colitis.

I have recently received important funding to further my investigations on gastric cancer. We have identified particular mutations in genes involved in the innate immune response that dramatically increase the risk of gastric cancer in three different ethnic groups (East Asians, South Americans and Caucasians). Investigating these mutations will allow us to identify those who are genetically susceptible to developing gastric cancer and, if they are infected with Helicobacter pylori (which is the main risk factor for gastric cancer) selectively treating them for the infection and closely surveying them. This is highly relevant for disadvantaged communities including those living in developing countries and Aboriginal communities in Australia, in whom gastric cancer is highly prevalent.

My work is particularly focussed on autophagy, which is defined as a degradation process in which external material is taken up by and degraded within the cell. Our investigations will hopefully help us identify autophagy-related host factors involved in the regulation of the gastric microbiome. We want to increase our understanding of microbially-disrupted autophagy (via Helicobacter pylori and other bacteria likely to cause cancer) and its contribution to gastric cancer and chemoresistance, which could be translated into potential therapeutic targets.

 

What are you most excited by in this fast-growing field of cancer genetics and the microbiome?

The combination of host mutations, environmental factors and microorganisms in the gastrointestinal tract contribute to the development of gastrointestinal cancers and other chronic inflammatory conditions. With current technologies, it is now possible to collectively characterise and quantify pools of biological molecules (DNA, RNA, proteins and metabolites) of an organism or many organisms simultaneously. I trust this will help us identify robust biomarkers and therapeutic targets for these diseases in the near future.

 

What does your average day look like (at work and outside of work)?

I guess the first thing that it would be important to point out is that when you work in research you don’t have a 9-5 job, you are in the lab as long as you need to be, even if that sometimes means late nights and weekends. And even if we are not physically in the lab, we are always connected somehow via email or working on something at home. But this doesn’t mean that we can’t have a balanced life; we can, and we do, and our universities are currently working very hard to teach us how to have fulfilling lives without compromising our research output. Happy researchers are more likely to be successful at publishing and getting funding, which are normally the parameters used to evaluate our performance.

A standard day involves waking up early to exercise and to have enough time to talk to my parents on the phone. They both live in Colombia but as a classic Latin American family, we are extremely close. Then, I get to work at 9-10am to first discuss with my students about the experiments that they will be doing or any other concerns. Then, I usually move to my desk to answer urgent emails, analyse data or continue writing something (e.g. a manuscript, grant application, fellowship application, promotion application, reviewing someone else’s work). It is also normal to have one or two meetings scheduled either with collaborators, committees or my own students. Between 4-7:30 pm, I usually return to my desk to try to continue writing or to focus my attention on lab management tasks (e.g. accounting, orders, safety, etc.). I will then meet my husband, who is also a medical researcher at UNSW, to walk back home while we discuss our days and what’s for dinner.

Outside work, I am passionate about dogs, outdoor activities (particularly speed skating) and dancing. Most importantly, I am very lucky to have a wonderful husband who shares my work and personal interests.

I’m curious about your journey so far. What brought you to UNSW? You transitioned from being a clinical doctor to research – what initiated that change?

My story started in 2009, following the completion of my Doctor of Medicine degree in Colombia.  I decided to leave my home country to come to Australia and pursue my dream of becoming a clinician researcher by undertaking a Masters degree, which was followed by a PhD. As an international student, I was fortunate enough to receive a number of scholarships from Colombia and Australia to be able to fund these studies. At the time, I was also very lucky to have an excellent supervisor and mentor, Prof Hazel Mitchell. She was extremely supportive and quickly became a role model, as the first female professor in the School of BABS.

I was then awarded an Early Career Fellowship by the National Health and Medical Research Council to expand my work on the role of the immune system and genetic factors, particularly related to pattern recognition receptors (host sensors that detect pathogens) and autophagy, in gastric cancer (2016- 2020). I was further awarded a Cancer Australia Priority-driven Collaborative Cancer Research Scheme Young Investigator Grant (2017) as well as a Gastroenterology Society of Australia Project Grant (2019) to investigate the contribution of dysregulated autophagy to the development of gastric cancer. More recently, I was awarded a Cancer Institute NSW Early Career Fellowship and a UNSW Scientia Fellowship to continue my investigations and cement myself as an emerging leader in the field.

 

You’ve clearly established yourself as a serious and successful scientist! Have you always been interested in science? Are there any memories that inspired you to be a doctor and/or get a PhD?

I have always been interested in immunogenetics of cancer, even as a young medical student who lived in Colombia, a developing country with limited research potential. My first research project while I was a medical student was on immunotherapy for melanoma. However, it was probably the death of a young patient presenting with pancreatic cancer who was assigned to me during a rotation in internal medicine, that made me realize that I wanted to dedicate my life to cancer research to find ways to prevent the disease and improve the quality of life and survival rates of patients. More recently, I was personally affected by the death of a close friend who was only 33 when she lost her battle against lung cancer. Her bravery was an example to me and made me feel more committed than ever to cancer research.

 

What inspired you to be a UNSW Maths and Science Champion?

I believe that the UNSW Women in Maths and Science Champions Program is a unique opportunity to consolidate essential skills for good and effective leadership, and improved communications skills to share your research with the wider community and the next generation of female researchers. I also believe this program is important to network with other vibrant female researchers and foster collaborations to promote, enhance and complement areas of research led by women at UNSW.

 

What should we be doing more of in society to promote women in STEM? 

To showcase successful young females involved in STEM is a powerful tool to bring down stereotypes and show our girls that they can also be researchers, mathematicians, doctors, etc. However, I cannot stop myself from thinking that we need to do more. As long as our governments don’t invest more in female education, our impact will always be limited. This is particularly important in developing countries, where access to higher education is difficult and extremely expensive.

 

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